Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFF93486.1 | SFF93521.1 | SAMN04488063_0849 | SAMN04488063_0850 | Lon-B peptidase. Serine peptidase. MEROPS family S16; Belongs to the peptidase S16 family. | Membrane protease YdiL, CAAX protease family. | 0.810 |
SFF93486.1 | SFG39129.1 | SAMN04488063_0849 | SAMN04488063_1895 | Lon-B peptidase. Serine peptidase. MEROPS family S16; Belongs to the peptidase S16 family. | Small ribonucleoprotein. | 0.668 |
SFF93486.1 | SFG42832.1 | SAMN04488063_0849 | SAMN04488063_2012 | Lon-B peptidase. Serine peptidase. MEROPS family S16; Belongs to the peptidase S16 family. | DNA modification methylase. | 0.798 |
SFF93486.1 | SFG57724.1 | SAMN04488063_0849 | SAMN04488063_2474 | Lon-B peptidase. Serine peptidase. MEROPS family S16; Belongs to the peptidase S16 family. | Hypothetical protein. | 0.675 |
SFF93486.1 | SFG63463.1 | SAMN04488063_0849 | SAMN04488063_2667 | Lon-B peptidase. Serine peptidase. MEROPS family S16; Belongs to the peptidase S16 family. | PDZ domain-containing protein. | 0.806 |
SFF93486.1 | SFG76970.1 | SAMN04488063_0849 | SAMN04488063_2880 | Lon-B peptidase. Serine peptidase. MEROPS family S16; Belongs to the peptidase S16 family. | Serine protease, S1-C subfamily, contains C-terminal PDZ domain. | 0.669 |
SFF93486.1 | dnaJ | SAMN04488063_0849 | SAMN04488063_2920 | Lon-B peptidase. Serine peptidase. MEROPS family S16; Belongs to the peptidase S16 family. | Molecular chaperone DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, [...] | 0.681 |
SFF93486.1 | dnaK | SAMN04488063_0849 | SAMN04488063_2921 | Lon-B peptidase. Serine peptidase. MEROPS family S16; Belongs to the peptidase S16 family. | Molecular chaperone DnaK; Acts as a chaperone. | 0.851 |
SFF93486.1 | grpE | SAMN04488063_0849 | SAMN04488063_2923 | Lon-B peptidase. Serine peptidase. MEROPS family S16; Belongs to the peptidase S16 family. | Molecular chaperone GrpE; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP [...] | 0.905 |
SFF93486.1 | rpl40e | SAMN04488063_0849 | SAMN04488063_0533 | Lon-B peptidase. Serine peptidase. MEROPS family S16; Belongs to the peptidase S16 family. | Large subunit ribosomal protein L40e; Belongs to the eukaryotic ribosomal protein eL40 family. | 0.722 |
SFF93521.1 | SFF93486.1 | SAMN04488063_0850 | SAMN04488063_0849 | Membrane protease YdiL, CAAX protease family. | Lon-B peptidase. Serine peptidase. MEROPS family S16; Belongs to the peptidase S16 family. | 0.810 |
SFG39129.1 | SFF93486.1 | SAMN04488063_1895 | SAMN04488063_0849 | Small ribonucleoprotein. | Lon-B peptidase. Serine peptidase. MEROPS family S16; Belongs to the peptidase S16 family. | 0.668 |
SFG39129.1 | SFG57724.1 | SAMN04488063_1895 | SAMN04488063_2474 | Small ribonucleoprotein. | Hypothetical protein. | 0.489 |
SFG39129.1 | rpl40e | SAMN04488063_1895 | SAMN04488063_0533 | Small ribonucleoprotein. | Large subunit ribosomal protein L40e; Belongs to the eukaryotic ribosomal protein eL40 family. | 0.623 |
SFG42832.1 | SFF93486.1 | SAMN04488063_2012 | SAMN04488063_0849 | DNA modification methylase. | Lon-B peptidase. Serine peptidase. MEROPS family S16; Belongs to the peptidase S16 family. | 0.798 |
SFG57724.1 | SFF93486.1 | SAMN04488063_2474 | SAMN04488063_0849 | Hypothetical protein. | Lon-B peptidase. Serine peptidase. MEROPS family S16; Belongs to the peptidase S16 family. | 0.675 |
SFG57724.1 | SFG39129.1 | SAMN04488063_2474 | SAMN04488063_1895 | Hypothetical protein. | Small ribonucleoprotein. | 0.489 |
SFG57724.1 | SFG63463.1 | SAMN04488063_2474 | SAMN04488063_2667 | Hypothetical protein. | PDZ domain-containing protein. | 0.426 |
SFG57724.1 | rpl40e | SAMN04488063_2474 | SAMN04488063_0533 | Hypothetical protein. | Large subunit ribosomal protein L40e; Belongs to the eukaryotic ribosomal protein eL40 family. | 0.697 |
SFG63463.1 | SFF93486.1 | SAMN04488063_2667 | SAMN04488063_0849 | PDZ domain-containing protein. | Lon-B peptidase. Serine peptidase. MEROPS family S16; Belongs to the peptidase S16 family. | 0.806 |
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