Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFF82808.1 | SFF92448.1 | SAMN04488063_0443 | SAMN04488063_0815 | Hypothetical protein. | Type IV secretory pathway ATPase VirB11/Archaellum biosynthesis ATPase. | 0.512 |
SFF82808.1 | SFF92480.1 | SAMN04488063_0443 | SAMN04488063_0816 | Hypothetical protein. | Hypothetical protein. | 0.717 |
SFF82808.1 | SFF94576.1 | SAMN04488063_0443 | SAMN04488063_0882 | Hypothetical protein. | Putative phosphoesterase. | 0.468 |
SFF82808.1 | SFG09340.1 | SAMN04488063_0443 | SAMN04488063_1399 | Hypothetical protein. | Sugar-specific transcriptional regulator TrmB. | 0.604 |
SFF89592.1 | SFF92480.1 | SAMN04488063_0697 | SAMN04488063_0816 | Type IV secretory pathway ATPase VirB11/Archaellum biosynthesis ATPase. | Hypothetical protein. | 0.430 |
SFF89592.1 | SFF94576.1 | SAMN04488063_0697 | SAMN04488063_0882 | Type IV secretory pathway ATPase VirB11/Archaellum biosynthesis ATPase. | Putative phosphoesterase. | 0.485 |
SFF92448.1 | SFF82808.1 | SAMN04488063_0815 | SAMN04488063_0443 | Type IV secretory pathway ATPase VirB11/Archaellum biosynthesis ATPase. | Hypothetical protein. | 0.512 |
SFF92448.1 | SFF92480.1 | SAMN04488063_0815 | SAMN04488063_0816 | Type IV secretory pathway ATPase VirB11/Archaellum biosynthesis ATPase. | Hypothetical protein. | 0.921 |
SFF92448.1 | SFF94576.1 | SAMN04488063_0815 | SAMN04488063_0882 | Type IV secretory pathway ATPase VirB11/Archaellum biosynthesis ATPase. | Putative phosphoesterase. | 0.494 |
SFF92448.1 | SFG37553.1 | SAMN04488063_0815 | SAMN04488063_1850 | Type IV secretory pathway ATPase VirB11/Archaellum biosynthesis ATPase. | ATP-dependent helicase Lhr and Lhr-like helicase. | 0.423 |
SFF92480.1 | SFF82808.1 | SAMN04488063_0816 | SAMN04488063_0443 | Hypothetical protein. | Hypothetical protein. | 0.717 |
SFF92480.1 | SFF89592.1 | SAMN04488063_0816 | SAMN04488063_0697 | Hypothetical protein. | Type IV secretory pathway ATPase VirB11/Archaellum biosynthesis ATPase. | 0.430 |
SFF92480.1 | SFF92448.1 | SAMN04488063_0816 | SAMN04488063_0815 | Hypothetical protein. | Type IV secretory pathway ATPase VirB11/Archaellum biosynthesis ATPase. | 0.921 |
SFF92480.1 | SFF94576.1 | SAMN04488063_0816 | SAMN04488063_0882 | Hypothetical protein. | Putative phosphoesterase. | 0.530 |
SFF92480.1 | SFG09340.1 | SAMN04488063_0816 | SAMN04488063_1399 | Hypothetical protein. | Sugar-specific transcriptional regulator TrmB. | 0.588 |
SFF94544.1 | SFF94576.1 | SAMN04488063_0881 | SAMN04488063_0882 | Putative transcriptional regulator. | Putative phosphoesterase. | 0.618 |
SFF94576.1 | SFF82808.1 | SAMN04488063_0882 | SAMN04488063_0443 | Putative phosphoesterase. | Hypothetical protein. | 0.468 |
SFF94576.1 | SFF89592.1 | SAMN04488063_0882 | SAMN04488063_0697 | Putative phosphoesterase. | Type IV secretory pathway ATPase VirB11/Archaellum biosynthesis ATPase. | 0.485 |
SFF94576.1 | SFF92448.1 | SAMN04488063_0882 | SAMN04488063_0815 | Putative phosphoesterase. | Type IV secretory pathway ATPase VirB11/Archaellum biosynthesis ATPase. | 0.494 |
SFF94576.1 | SFF92480.1 | SAMN04488063_0882 | SAMN04488063_0816 | Putative phosphoesterase. | Hypothetical protein. | 0.530 |
page 1 of 2