STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFG03426.1IMP dehydrogenase. (261 aa)    
Predicted Functional Partners:
SFG03404.1
nanoRNase/pAp phosphatase, hydrolyzes c-di-AMP and oligoRNAs.
 
    0.704
SFH05446.1
Chromosome partitioning protein.
  
 
 0.621
SFG70982.1
Chromosome partitioning protein.
  
 
 0.621
SFG84056.1
Chromosome partitioning protein.
  
 
 0.621
SFG91367.1
AAA domain-containing protein.
  
 
 0.621
SFG94874.1
Chromosome partitioning protein.
  
 
 0.621
SFF83435.1
Homoserine dehydrogenase.
    
 0.569
SFG38090.1
Cys/Met metabolism PLP-dependent enzyme.
     
 0.531
mptD
Hypothetical protein; Catalyzes the conversion of 7,8-dihydroneopterin (H2Neo) to 6-hydroxymethyl-7,8-dihydropterin (6-HMD); Belongs to the archaeal dihydroneopterin aldolase family.
  
     0.484
SFG41972.1
BirA family transcriptional regulator, biotin operon repressor / biotin-[acetyl-CoA-carboxylase] ligase.
  
  
 0.467
Your Current Organism:
Halopelagius inordinatus
NCBI taxonomy Id: 553467
Other names: CGMCC 1.7739, H. inordinatus, Halobacteriaceae archaeon RO5-14, Halobacteriaceae archaeon RO5-2, Halopelagius inordinatus Cui et al. 2010, JCM 15773, strain RO5-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.