STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFG12650.1PAS domain S-box-containing protein. (782 aa)    
Predicted Functional Partners:
SFG12676.1
GAF domain-containing protein.
 
 
 0.885
cheB
Two-component system, chemotaxis family, response regulator CheB; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.
 
 
 0.852
SFG07209.1
Chemotaxis protein methyltransferase CheR.
  
 0.831
SFG07305.1
Purine-binding chemotaxis protein CheW.
  
  
 0.825
SFF88157.1
Methyl-accepting chemotaxis protein.
  
  
  0.823
SFG57024.1
Methyl-accepting chemotaxis protein.
  
  
  0.823
SFF94269.1
Pyruvate kinase; Belongs to the pyruvate kinase family.
    
  0.821
SFG07243.1
Two-component system, chemotaxis family, sensor kinase CheA.
  
  
  0.815
SFG33194.1
PAS domain S-box-containing protein.
 
  
 
0.768
SFG09306.1
Response regulator receiver domain-containing protein.
  
 
 0.723
Your Current Organism:
Halopelagius inordinatus
NCBI taxonomy Id: 553467
Other names: CGMCC 1.7739, H. inordinatus, Halobacteriaceae archaeon RO5-14, Halobacteriaceae archaeon RO5-2, Halopelagius inordinatus Cui et al. 2010, JCM 15773, strain RO5-2
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.