STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFG14093.1Cytochrome c oxidase subunit 1; Belongs to the heme-copper respiratory oxidase family. (667 aa)    
Predicted Functional Partners:
SFH06255.1
NADH-quinone oxidoreductase subunit C/D.
   
 
 0.999
SFG03168.1
NADH dehydrogenase subunit C.
   
 
 0.999
SFG04441.1
Cytochrome c oxidase subunit 3.
 0.999
SFG73606.1
NADH dehydrogenase subunit C.
   
 
 0.999
SFG02109.1
Cytochrome c oxidase subunit 2.
 
 0.995
ctaB
Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group.
 
 0.993
SFG95008.1
Hypothetical protein.
  
 0.981
SFG03323.1
NADH dehydrogenase subunit M.
  
 
 0.980
SFF95441.1
Cytochrome b(N-terminal)/b6/petB.
 
 0.974
SFG03188.1
NADH dehydrogenase subunit H.
  
 
 0.972
Your Current Organism:
Halopelagius inordinatus
NCBI taxonomy Id: 553467
Other names: CGMCC 1.7739, H. inordinatus, Halobacteriaceae archaeon RO5-14, Halobacteriaceae archaeon RO5-2, Halopelagius inordinatus Cui et al. 2010, JCM 15773, strain RO5-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.