STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFG16677.1PTS system, fructose-specific IIC component. (382 aa)    
Predicted Functional Partners:
SFG16706.1
1-phosphofructokinase.
 
 
 0.999
SFG16572.1
PTS system, fructose-specific IIB component.
 
 0.998
SFG16653.1
PTS system, fructose-specific IIA component.
 
 0.998
SFG16598.1
Phosphotransferase system, enzyme I, PtsI.
 
 
 0.979
SFG16624.1
Phosphocarrier protein.
  
 
 0.901
SFG63224.1
Beta-fructofuranosidase.
  
 
 0.833
SFF84319.1
Glucokinase.
    
 0.802
SFG16537.1
Fructose-bisphosphate aldolase, class II; Manually curated.
  
 
 0.752
SFG76676.1
Phosphocarrier protein HPr.
  
 
 0.750
SFG06595.1
Fructokinase.
     
 0.747
Your Current Organism:
Halopelagius inordinatus
NCBI taxonomy Id: 553467
Other names: CGMCC 1.7739, H. inordinatus, Halobacteriaceae archaeon RO5-14, Halobacteriaceae archaeon RO5-2, Halopelagius inordinatus Cui et al. 2010, JCM 15773, strain RO5-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.