STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFG38898.1NAD-dependent dihydropyrimidine dehydrogenase, PreA subunit; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. (109 aa)    
Predicted Functional Partners:
SFG36049.1
Succinate dehydrogenase / fumarate reductase flavoprotein subunit.
  
 0.929
SFG80791.1
FAD/FMN-containing dehydrogenase.
  
 
  0.839
SFG84443.1
FAD/FMN-containing dehydrogenase.
  
 
  0.839
SFH01112.1
Pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase).
     
 0.839
SFG38786.1
Electron transfer flavoprotein-quinone oxidoreductase.
 
   
 0.806
SFH06255.1
NADH-quinone oxidoreductase subunit C/D.
    
  0.800
SFG03168.1
NADH dehydrogenase subunit C.
    
  0.800
SFG73606.1
NADH dehydrogenase subunit C.
    
  0.800
SFG38860.1
Electron transfer flavoprotein beta subunit.
 
 
 
 0.797
SFG99346.1
Malate dehydrogenase; Belongs to the LDH/MDH superfamily.
  
  
 0.627
Your Current Organism:
Halopelagius inordinatus
NCBI taxonomy Id: 553467
Other names: CGMCC 1.7739, H. inordinatus, Halobacteriaceae archaeon RO5-14, Halobacteriaceae archaeon RO5-2, Halopelagius inordinatus Cui et al. 2010, JCM 15773, strain RO5-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.