Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFG47499.1 | SFG47538.1 | SAMN04488063_2167 | SAMN04488063_2168 | Ribokinase. | Uncharacterized membrane protein. | 0.529 |
SFG47499.1 | deoC | SAMN04488063_2167 | SAMN04488063_2170 | Ribokinase. | Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily. | 0.827 |
SFG47538.1 | SFG47499.1 | SAMN04488063_2168 | SAMN04488063_2167 | Uncharacterized membrane protein. | Ribokinase. | 0.529 |
SFG47538.1 | SFG47577.1 | SAMN04488063_2168 | SAMN04488063_2169 | Uncharacterized membrane protein. | Hypothetical protein. | 0.558 |
SFG47538.1 | deoC | SAMN04488063_2168 | SAMN04488063_2170 | Uncharacterized membrane protein. | Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily. | 0.529 |
SFG47577.1 | SFG47538.1 | SAMN04488063_2169 | SAMN04488063_2168 | Hypothetical protein. | Uncharacterized membrane protein. | 0.558 |
SFG47577.1 | deoC | SAMN04488063_2169 | SAMN04488063_2170 | Hypothetical protein. | Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily. | 0.598 |
deoC | SFG47499.1 | SAMN04488063_2170 | SAMN04488063_2167 | Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily. | Ribokinase. | 0.827 |
deoC | SFG47538.1 | SAMN04488063_2170 | SAMN04488063_2168 | Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily. | Uncharacterized membrane protein. | 0.529 |
deoC | SFG47577.1 | SAMN04488063_2170 | SAMN04488063_2169 | Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily. | Hypothetical protein. | 0.598 |