Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFG41972.1 | SFG53145.1 | SAMN04488063_1986 | SAMN04488063_2325 | BirA family transcriptional regulator, biotin operon repressor / biotin-[acetyl-CoA-carboxylase] ligase. | Competence protein ComEC. | 0.584 |
SFG41972.1 | SFG53173.1 | SAMN04488063_1986 | SAMN04488063_2326 | BirA family transcriptional regulator, biotin operon repressor / biotin-[acetyl-CoA-carboxylase] ligase. | NADH-FMN oxidoreductase RutF, flavin reductase (DIM6/NTAB) family. | 0.493 |
SFG53080.1 | SFG53112.1 | SAMN04488063_2323 | SAMN04488063_2324 | Hypothetical protein. | Protein of unknown function. | 0.489 |
SFG53080.1 | SFG53145.1 | SAMN04488063_2323 | SAMN04488063_2325 | Hypothetical protein. | Competence protein ComEC. | 0.489 |
SFG53112.1 | SFG53080.1 | SAMN04488063_2324 | SAMN04488063_2323 | Protein of unknown function. | Hypothetical protein. | 0.489 |
SFG53112.1 | SFG53145.1 | SAMN04488063_2324 | SAMN04488063_2325 | Protein of unknown function. | Competence protein ComEC. | 0.806 |
SFG53112.1 | SFG53173.1 | SAMN04488063_2324 | SAMN04488063_2326 | Protein of unknown function. | NADH-FMN oxidoreductase RutF, flavin reductase (DIM6/NTAB) family. | 0.520 |
SFG53145.1 | SFG41972.1 | SAMN04488063_2325 | SAMN04488063_1986 | Competence protein ComEC. | BirA family transcriptional regulator, biotin operon repressor / biotin-[acetyl-CoA-carboxylase] ligase. | 0.584 |
SFG53145.1 | SFG53080.1 | SAMN04488063_2325 | SAMN04488063_2323 | Competence protein ComEC. | Hypothetical protein. | 0.489 |
SFG53145.1 | SFG53112.1 | SAMN04488063_2325 | SAMN04488063_2324 | Competence protein ComEC. | Protein of unknown function. | 0.806 |
SFG53145.1 | SFG53173.1 | SAMN04488063_2325 | SAMN04488063_2326 | Competence protein ComEC. | NADH-FMN oxidoreductase RutF, flavin reductase (DIM6/NTAB) family. | 0.524 |
SFG53145.1 | SFG96901.1 | SAMN04488063_2325 | SAMN04488063_3457 | Competence protein ComEC. | Type IV secretory pathway, VirB4 component. | 0.435 |
SFG53173.1 | SFG41972.1 | SAMN04488063_2326 | SAMN04488063_1986 | NADH-FMN oxidoreductase RutF, flavin reductase (DIM6/NTAB) family. | BirA family transcriptional regulator, biotin operon repressor / biotin-[acetyl-CoA-carboxylase] ligase. | 0.493 |
SFG53173.1 | SFG53112.1 | SAMN04488063_2326 | SAMN04488063_2324 | NADH-FMN oxidoreductase RutF, flavin reductase (DIM6/NTAB) family. | Protein of unknown function. | 0.520 |
SFG53173.1 | SFG53145.1 | SAMN04488063_2326 | SAMN04488063_2325 | NADH-FMN oxidoreductase RutF, flavin reductase (DIM6/NTAB) family. | Competence protein ComEC. | 0.524 |
SFG96901.1 | SFG53145.1 | SAMN04488063_3457 | SAMN04488063_2325 | Type IV secretory pathway, VirB4 component. | Competence protein ComEC. | 0.435 |