Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFF82567.1 | SFF88678.1 | SAMN04488063_0435 | SAMN04488063_0660 | Adenine phosphoribosyltransferase. | TIGR00269 family protein. | 0.552 |
SFF82567.1 | SFF91017.1 | SAMN04488063_0435 | SAMN04488063_0755 | Adenine phosphoribosyltransferase. | 5'-methylthioadenosine phosphorylase; Purine nucleoside phosphorylase involved in purine salvage. | 0.793 |
SFF82567.1 | SFG56217.1 | SAMN04488063_0435 | SAMN04488063_2424 | Adenine phosphoribosyltransferase. | Purine nucleosidase. | 0.777 |
SFF82567.1 | SFG95315.1 | SAMN04488063_0435 | SAMN04488063_3392 | Adenine phosphoribosyltransferase. | 2',3'-cyclic-nucleotide 2'-phosphodiesterase/5'-or 3'-nucleotidase, 5'-nucleotidase family. | 0.756 |
SFF88678.1 | SFF82567.1 | SAMN04488063_0660 | SAMN04488063_0435 | TIGR00269 family protein. | Adenine phosphoribosyltransferase. | 0.552 |
SFF88678.1 | SFF99135.1 | SAMN04488063_0660 | SAMN04488063_1054 | TIGR00269 family protein. | Adenine phosphoribosyltransferase; May catalyze a purine salvage reaction, the substrate is unknown. | 0.552 |
SFF88678.1 | SFG56217.1 | SAMN04488063_0660 | SAMN04488063_2424 | TIGR00269 family protein. | Purine nucleosidase. | 0.824 |
SFF88678.1 | SFG77789.1 | SAMN04488063_0660 | SAMN04488063_2909 | TIGR00269 family protein. | Cytidine deaminase. | 0.460 |
SFF88678.1 | SFG95315.1 | SAMN04488063_0660 | SAMN04488063_3392 | TIGR00269 family protein. | 2',3'-cyclic-nucleotide 2'-phosphodiesterase/5'-or 3'-nucleotidase, 5'-nucleotidase family. | 0.564 |
SFF91017.1 | SFF82567.1 | SAMN04488063_0755 | SAMN04488063_0435 | 5'-methylthioadenosine phosphorylase; Purine nucleoside phosphorylase involved in purine salvage. | Adenine phosphoribosyltransferase. | 0.793 |
SFF91017.1 | SFF99135.1 | SAMN04488063_0755 | SAMN04488063_1054 | 5'-methylthioadenosine phosphorylase; Purine nucleoside phosphorylase involved in purine salvage. | Adenine phosphoribosyltransferase; May catalyze a purine salvage reaction, the substrate is unknown. | 0.806 |
SFF91017.1 | SFG56217.1 | SAMN04488063_0755 | SAMN04488063_2424 | 5'-methylthioadenosine phosphorylase; Purine nucleoside phosphorylase involved in purine salvage. | Purine nucleosidase. | 0.827 |
SFF91017.1 | SFG77789.1 | SAMN04488063_0755 | SAMN04488063_2909 | 5'-methylthioadenosine phosphorylase; Purine nucleoside phosphorylase involved in purine salvage. | Cytidine deaminase. | 0.809 |
SFF91017.1 | SFG95315.1 | SAMN04488063_0755 | SAMN04488063_3392 | 5'-methylthioadenosine phosphorylase; Purine nucleoside phosphorylase involved in purine salvage. | 2',3'-cyclic-nucleotide 2'-phosphodiesterase/5'-or 3'-nucleotidase, 5'-nucleotidase family. | 0.588 |
SFF91017.1 | SFH01564.1 | SAMN04488063_0755 | SAMN04488063_3601 | 5'-methylthioadenosine phosphorylase; Purine nucleoside phosphorylase involved in purine salvage. | Dihydroorotate oxidase A. | 0.810 |
SFF91017.1 | udk | SAMN04488063_0755 | SAMN04488063_1812 | 5'-methylthioadenosine phosphorylase; Purine nucleoside phosphorylase involved in purine salvage. | Uridine kinase. | 0.832 |
SFF91017.1 | upp | SAMN04488063_0755 | SAMN04488063_3552 | 5'-methylthioadenosine phosphorylase; Purine nucleoside phosphorylase involved in purine salvage. | Uracil phosphoribosyltransferase; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate. | 0.837 |
SFF99135.1 | SFF88678.1 | SAMN04488063_1054 | SAMN04488063_0660 | Adenine phosphoribosyltransferase; May catalyze a purine salvage reaction, the substrate is unknown. | TIGR00269 family protein. | 0.552 |
SFF99135.1 | SFF91017.1 | SAMN04488063_1054 | SAMN04488063_0755 | Adenine phosphoribosyltransferase; May catalyze a purine salvage reaction, the substrate is unknown. | 5'-methylthioadenosine phosphorylase; Purine nucleoside phosphorylase involved in purine salvage. | 0.806 |
SFF99135.1 | SFG56217.1 | SAMN04488063_1054 | SAMN04488063_2424 | Adenine phosphoribosyltransferase; May catalyze a purine salvage reaction, the substrate is unknown. | Purine nucleosidase. | 0.777 |
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