Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFF83847.1 | SFG58517.1 | SAMN04488063_0478 | SAMN04488063_2498 | Ribonuclease R. | ADP-ribose pyrophosphatase. | 0.557 |
SFF83847.1 | SFG60441.1 | SAMN04488063_0478 | SAMN04488063_2554 | Ribonuclease R. | ADP-ribose pyrophosphatase. | 0.557 |
SFF83847.1 | flpA | SAMN04488063_0478 | SAMN04488063_2986 | Ribonuclease R. | Fibrillarin-like pre-rRNA processing protein; Involved in pre-rRNA and tRNA processing. Utilizes the methyl donor S-adenosyl-L-methionine to catalyze the site-specific 2'-hydroxyl methylation of ribose moieties in rRNA and tRNA. Site specificity is provided by a guide RNA that base pairs with the substrate. Methylation occurs at a characteristic distance from the sequence involved in base pairing with the guide RNA; Belongs to the methyltransferase superfamily. Fibrillarin family. | 0.654 |
SFG58246.1 | SFG58517.1 | SAMN04488063_2490 | SAMN04488063_2498 | Archaeosine synthase. | ADP-ribose pyrophosphatase. | 0.418 |
SFG58246.1 | SFG60441.1 | SAMN04488063_2490 | SAMN04488063_2554 | Archaeosine synthase. | ADP-ribose pyrophosphatase. | 0.418 |
SFG58458.1 | SFG58486.1 | SAMN04488063_2496 | SAMN04488063_2497 | GMP synthase (glutamine-hydrolysing). | Hypothetical protein. | 0.574 |
SFG58458.1 | SFG58517.1 | SAMN04488063_2496 | SAMN04488063_2498 | GMP synthase (glutamine-hydrolysing). | ADP-ribose pyrophosphatase. | 0.522 |
SFG58486.1 | SFG58458.1 | SAMN04488063_2497 | SAMN04488063_2496 | Hypothetical protein. | GMP synthase (glutamine-hydrolysing). | 0.574 |
SFG58486.1 | SFG58517.1 | SAMN04488063_2497 | SAMN04488063_2498 | Hypothetical protein. | ADP-ribose pyrophosphatase. | 0.679 |
SFG58486.1 | SFG58548.1 | SAMN04488063_2497 | SAMN04488063_2499 | Hypothetical protein. | Hypothetical protein. | 0.664 |
SFG58486.1 | SFG58580.1 | SAMN04488063_2497 | SAMN04488063_2500 | Hypothetical protein. | Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily protein. | 0.519 |
SFG58517.1 | SFF83847.1 | SAMN04488063_2498 | SAMN04488063_0478 | ADP-ribose pyrophosphatase. | Ribonuclease R. | 0.557 |
SFG58517.1 | SFG58246.1 | SAMN04488063_2498 | SAMN04488063_2490 | ADP-ribose pyrophosphatase. | Archaeosine synthase. | 0.418 |
SFG58517.1 | SFG58458.1 | SAMN04488063_2498 | SAMN04488063_2496 | ADP-ribose pyrophosphatase. | GMP synthase (glutamine-hydrolysing). | 0.522 |
SFG58517.1 | SFG58486.1 | SAMN04488063_2498 | SAMN04488063_2497 | ADP-ribose pyrophosphatase. | Hypothetical protein. | 0.679 |
SFG58517.1 | SFG58548.1 | SAMN04488063_2498 | SAMN04488063_2499 | ADP-ribose pyrophosphatase. | Hypothetical protein. | 0.678 |
SFG58517.1 | SFG58580.1 | SAMN04488063_2498 | SAMN04488063_2500 | ADP-ribose pyrophosphatase. | Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily protein. | 0.489 |
SFG58517.1 | SFG58644.1 | SAMN04488063_2498 | SAMN04488063_2502 | ADP-ribose pyrophosphatase. | Proline racemase. | 0.518 |
SFG58517.1 | SFG60441.1 | SAMN04488063_2498 | SAMN04488063_2554 | ADP-ribose pyrophosphatase. | ADP-ribose pyrophosphatase. | 0.786 |
SFG58517.1 | flpA | SAMN04488063_2498 | SAMN04488063_2986 | ADP-ribose pyrophosphatase. | Fibrillarin-like pre-rRNA processing protein; Involved in pre-rRNA and tRNA processing. Utilizes the methyl donor S-adenosyl-L-methionine to catalyze the site-specific 2'-hydroxyl methylation of ribose moieties in rRNA and tRNA. Site specificity is provided by a guide RNA that base pairs with the substrate. Methylation occurs at a characteristic distance from the sequence involved in base pairing with the guide RNA; Belongs to the methyltransferase superfamily. Fibrillarin family. | 0.580 |
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