STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFG59465.1PAS domain S-box-containing protein. (568 aa)    
Predicted Functional Partners:
SFG59522.1
4-hydroxybenzoate polyprenyltransferase.
 
     0.805
SFF94269.1
Pyruvate kinase; Belongs to the pyruvate kinase family.
    
  0.750
SFG57024.1
Methyl-accepting chemotaxis protein.
  
  
  0.682
SFF88157.1
Methyl-accepting chemotaxis protein.
  
  
  0.664
SFF78191.1
Inner membrane component domain-containing protein.
  
     0.534
SFG07890.1
Hypothetical protein.
  
     0.516
SFG09306.1
Response regulator receiver domain-containing protein.
  
 
   0.480
SFG06103.1
Hypothetical protein.
  
     0.476
SFF94952.1
GAF domain-containing protein.
  
 
   0.454
SFF90184.1
Response regulator receiver domain-containing protein.
  
 
   0.446
Your Current Organism:
Halopelagius inordinatus
NCBI taxonomy Id: 553467
Other names: CGMCC 1.7739, H. inordinatus, Halobacteriaceae archaeon RO5-14, Halobacteriaceae archaeon RO5-2, Halopelagius inordinatus Cui et al. 2010, JCM 15773, strain RO5-2
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.