STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFG72161.1Transcriptional regulator, IclR family. (264 aa)    
Predicted Functional Partners:
SFG72108.1
Creatinine amidohydrolase.
       0.556
SFG72132.1
Multiple sugar transport system ATP-binding protein.
       0.556
SFG90179.1
Urea carboxylase.
  
    0.490
SFG90159.1
Biotin-dependent carboxylase uncharacterized domain-containing protein.
  
    0.448
SFG72086.1
ABC-type glycerol-3-phosphate transport system, substrate-binding protein.
  
    0.422
SFG72031.1
Multiple sugar transport system permease protein.
       0.411
SFG72057.1
Multiple sugar transport system permease protein.
       0.411
Your Current Organism:
Halopelagius inordinatus
NCBI taxonomy Id: 553467
Other names: CGMCC 1.7739, H. inordinatus, Halobacteriaceae archaeon RO5-14, Halobacteriaceae archaeon RO5-2, Halopelagius inordinatus Cui et al. 2010, JCM 15773, strain RO5-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.