STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFG74420.1Arylsulfatase A. (464 aa)    
Predicted Functional Partners:
SFG74451.1
Hypothetical protein.
 
     0.560
SFG73048.1
Predicted phosphohydrolase or phosphomutase, AlkP superfamily.
 
     0.525
SFF92343.1
Predicted phosphohydrolase or phosphomutase, AlkP superfamily.
 
     0.507
SFF75941.1
Ornithine carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. OTCase family.
   
    0.495
SFG41636.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
   0.478
SFG42419.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family.
  
   0.475
SFG72221.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family.
  
   0.468
SFG74390.1
Hypothetical protein.
       0.465
SFG01941.1
HEAT repeat-containing protein.
  
 
  0.445
SFG71926.1
Carbohydrate-binding family 9.
  
     0.430
Your Current Organism:
Halopelagius inordinatus
NCBI taxonomy Id: 553467
Other names: CGMCC 1.7739, H. inordinatus, Halobacteriaceae archaeon RO5-14, Halobacteriaceae archaeon RO5-2, Halopelagius inordinatus Cui et al. 2010, JCM 15773, strain RO5-2
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.