Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SFF92679.1 | dacZ | SAMN04488063_0823 | SAMN04488063_2977 | nanoRNase/pAp phosphatase, hydrolyzes c-di-AMP and oligoRNAs. | Diadenylate cyclase (c-di-AMP synthetase), DisA_N domain; Diadenylate cyclase that catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP). c-di-AMP is a second messenger for intracellular signal transduction involved in the control of important regulatory processes such as osmoregulation. | 0.488 |
| SFG03404.1 | SFG80295.1 | SAMN04488063_1205 | SAMN04488063_2998 | nanoRNase/pAp phosphatase, hydrolyzes c-di-AMP and oligoRNAs. | Uncharacterized protein, UPF0212 family; Belongs to the UPF0212 family. | 0.457 |
| SFG03404.1 | dacZ | SAMN04488063_1205 | SAMN04488063_2977 | nanoRNase/pAp phosphatase, hydrolyzes c-di-AMP and oligoRNAs. | Diadenylate cyclase (c-di-AMP synthetase), DisA_N domain; Diadenylate cyclase that catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP). c-di-AMP is a second messenger for intracellular signal transduction involved in the control of important regulatory processes such as osmoregulation. | 0.469 |
| SFG61956.1 | SFG63463.1 | SAMN04488063_2603 | SAMN04488063_2667 | NhaP-type Na+/H+ or K+/H+ antiporter. | PDZ domain-containing protein. | 0.556 |
| SFG61956.1 | dacZ | SAMN04488063_2603 | SAMN04488063_2977 | NhaP-type Na+/H+ or K+/H+ antiporter. | Diadenylate cyclase (c-di-AMP synthetase), DisA_N domain; Diadenylate cyclase that catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP). c-di-AMP is a second messenger for intracellular signal transduction involved in the control of important regulatory processes such as osmoregulation. | 0.544 |
| SFG63463.1 | SFG61956.1 | SAMN04488063_2667 | SAMN04488063_2603 | PDZ domain-containing protein. | NhaP-type Na+/H+ or K+/H+ antiporter. | 0.556 |
| SFG63463.1 | dacZ | SAMN04488063_2667 | SAMN04488063_2977 | PDZ domain-containing protein. | Diadenylate cyclase (c-di-AMP synthetase), DisA_N domain; Diadenylate cyclase that catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP). c-di-AMP is a second messenger for intracellular signal transduction involved in the control of important regulatory processes such as osmoregulation. | 0.497 |
| SFG79689.1 | SFG79722.1 | SAMN04488063_2975 | SAMN04488063_2976 | PAS domain S-box-containing protein. | Conserved TM helix. | 0.454 |
| SFG79689.1 | dacZ | SAMN04488063_2975 | SAMN04488063_2977 | PAS domain S-box-containing protein. | Diadenylate cyclase (c-di-AMP synthetase), DisA_N domain; Diadenylate cyclase that catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP). c-di-AMP is a second messenger for intracellular signal transduction involved in the control of important regulatory processes such as osmoregulation. | 0.454 |
| SFG79722.1 | SFG79689.1 | SAMN04488063_2976 | SAMN04488063_2975 | Conserved TM helix. | PAS domain S-box-containing protein. | 0.454 |
| SFG79722.1 | SFG79781.1 | SAMN04488063_2976 | SAMN04488063_2978 | Conserved TM helix. | Hypothetical protein. | 0.489 |
| SFG79722.1 | dacZ | SAMN04488063_2976 | SAMN04488063_2977 | Conserved TM helix. | Diadenylate cyclase (c-di-AMP synthetase), DisA_N domain; Diadenylate cyclase that catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP). c-di-AMP is a second messenger for intracellular signal transduction involved in the control of important regulatory processes such as osmoregulation. | 0.833 |
| SFG79781.1 | SFG79722.1 | SAMN04488063_2978 | SAMN04488063_2976 | Hypothetical protein. | Conserved TM helix. | 0.489 |
| SFG79781.1 | dacZ | SAMN04488063_2978 | SAMN04488063_2977 | Hypothetical protein. | Diadenylate cyclase (c-di-AMP synthetase), DisA_N domain; Diadenylate cyclase that catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP). c-di-AMP is a second messenger for intracellular signal transduction involved in the control of important regulatory processes such as osmoregulation. | 0.489 |
| SFG80295.1 | SFG03404.1 | SAMN04488063_2998 | SAMN04488063_1205 | Uncharacterized protein, UPF0212 family; Belongs to the UPF0212 family. | nanoRNase/pAp phosphatase, hydrolyzes c-di-AMP and oligoRNAs. | 0.457 |
| SFG80295.1 | SFG80645.1 | SAMN04488063_2998 | SAMN04488063_3012 | Uncharacterized protein, UPF0212 family; Belongs to the UPF0212 family. | DHHA1 domain-containing protein. | 0.544 |
| SFG80295.1 | SFG99323.1 | SAMN04488063_2998 | SAMN04488063_3506 | Uncharacterized protein, UPF0212 family; Belongs to the UPF0212 family. | Uncharacterized Zn-finger containing protein, UPF0148 family. | 0.596 |
| SFG80295.1 | dacZ | SAMN04488063_2998 | SAMN04488063_2977 | Uncharacterized protein, UPF0212 family; Belongs to the UPF0212 family. | Diadenylate cyclase (c-di-AMP synthetase), DisA_N domain; Diadenylate cyclase that catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP). c-di-AMP is a second messenger for intracellular signal transduction involved in the control of important regulatory processes such as osmoregulation. | 0.423 |
| SFG80645.1 | SFG80295.1 | SAMN04488063_3012 | SAMN04488063_2998 | DHHA1 domain-containing protein. | Uncharacterized protein, UPF0212 family; Belongs to the UPF0212 family. | 0.544 |
| SFG80645.1 | dacZ | SAMN04488063_3012 | SAMN04488063_2977 | DHHA1 domain-containing protein. | Diadenylate cyclase (c-di-AMP synthetase), DisA_N domain; Diadenylate cyclase that catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP). c-di-AMP is a second messenger for intracellular signal transduction involved in the control of important regulatory processes such as osmoregulation. | 0.516 |
page 1 of 2