STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFG92298.1Predicted dehydrogenase. (365 aa)    
Predicted Functional Partners:
SFG39783.1
Sugar phosphate isomerase/epimerase.
  
 
  0.720
SFG40386.1
Predicted dehydrogenase.
  
     0.720
SFG17346.1
Perosamine synthetase; Belongs to the DegT/DnrJ/EryC1 family.
 
 
 0.711
SFG02301.1
Predicted dehydrogenase.
 
     0.709
SFG54173.1
Sugar phosphate isomerase/epimerase.
  
 
  0.689
SFG92319.1
Hypothetical protein.
       0.540
SFG70320.1
UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing).
 
 
 0.523
SFG74507.1
Sugar phosphate isomerase/epimerase.
  
 
  0.499
SFG92339.1
Aldehyde dehydrogenase family protein.
  
 
  0.462
Your Current Organism:
Halopelagius inordinatus
NCBI taxonomy Id: 553467
Other names: CGMCC 1.7739, H. inordinatus, Halobacteriaceae archaeon RO5-14, Halobacteriaceae archaeon RO5-2, Halopelagius inordinatus Cui et al. 2010, JCM 15773, strain RO5-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.