Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFF89592.1 | SFG13865.1 | SAMN04488063_0697 | SAMN04488063_1541 | Type IV secretory pathway ATPase VirB11/Archaellum biosynthesis ATPase. | Uncharacterized conserved protein. | 0.469 |
SFF89592.1 | SFG63199.1 | SAMN04488063_0697 | SAMN04488063_2657 | Type IV secretory pathway ATPase VirB11/Archaellum biosynthesis ATPase. | Levansucrase; Belongs to the glycosyl hydrolase 68 family. | 0.432 |
SFF89592.1 | SFG96098.1 | SAMN04488063_0697 | SAMN04488063_3425 | Type IV secretory pathway ATPase VirB11/Archaellum biosynthesis ATPase. | Transposase and inactivated derivatives, IS5 family. | 0.527 |
SFG01400.1 | SFG48188.1 | SAMN04488063_1130 | SAMN04488063_2186 | Predicted PurR-regulated permease PerM. | Hypothetical protein. | 0.543 |
SFG01400.1 | SFG56125.1 | SAMN04488063_1130 | SAMN04488063_2421 | Predicted PurR-regulated permease PerM. | Protein of unknown function. | 0.577 |
SFG01400.1 | SFG74451.1 | SAMN04488063_1130 | SAMN04488063_2859 | Predicted PurR-regulated permease PerM. | Hypothetical protein. | 0.500 |
SFG01400.1 | SFG96098.1 | SAMN04488063_1130 | SAMN04488063_3425 | Predicted PurR-regulated permease PerM. | Transposase and inactivated derivatives, IS5 family. | 0.602 |
SFG01400.1 | SFH06237.1 | SAMN04488063_1130 | SAMN04488063_0054 | Predicted PurR-regulated permease PerM. | HTH DNA binding domain-containing protein. | 0.652 |
SFG13865.1 | SFF89592.1 | SAMN04488063_1541 | SAMN04488063_0697 | Uncharacterized conserved protein. | Type IV secretory pathway ATPase VirB11/Archaellum biosynthesis ATPase. | 0.469 |
SFG13865.1 | SFG56125.1 | SAMN04488063_1541 | SAMN04488063_2421 | Uncharacterized conserved protein. | Protein of unknown function. | 0.422 |
SFG13865.1 | SFG96098.1 | SAMN04488063_1541 | SAMN04488063_3425 | Uncharacterized conserved protein. | Transposase and inactivated derivatives, IS5 family. | 0.550 |
SFG48188.1 | SFG01400.1 | SAMN04488063_2186 | SAMN04488063_1130 | Hypothetical protein. | Predicted PurR-regulated permease PerM. | 0.543 |
SFG48188.1 | SFG74451.1 | SAMN04488063_2186 | SAMN04488063_2859 | Hypothetical protein. | Hypothetical protein. | 0.509 |
SFG48188.1 | SFG96098.1 | SAMN04488063_2186 | SAMN04488063_3425 | Hypothetical protein. | Transposase and inactivated derivatives, IS5 family. | 0.645 |
SFG48188.1 | SFH06237.1 | SAMN04488063_2186 | SAMN04488063_0054 | Hypothetical protein. | HTH DNA binding domain-containing protein. | 0.411 |
SFG56125.1 | SFG01400.1 | SAMN04488063_2421 | SAMN04488063_1130 | Protein of unknown function. | Predicted PurR-regulated permease PerM. | 0.577 |
SFG56125.1 | SFG13865.1 | SAMN04488063_2421 | SAMN04488063_1541 | Protein of unknown function. | Uncharacterized conserved protein. | 0.422 |
SFG56125.1 | SFG63199.1 | SAMN04488063_2421 | SAMN04488063_2657 | Protein of unknown function. | Levansucrase; Belongs to the glycosyl hydrolase 68 family. | 0.461 |
SFG56125.1 | SFG96098.1 | SAMN04488063_2421 | SAMN04488063_3425 | Protein of unknown function. | Transposase and inactivated derivatives, IS5 family. | 0.667 |
SFG56125.1 | SFH06237.1 | SAMN04488063_2421 | SAMN04488063_0054 | Protein of unknown function. | HTH DNA binding domain-containing protein. | 0.565 |
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