STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFR36296.1Hypothetical protein. (101 aa)    
Predicted Functional Partners:
SFR36303.1
Hypothetical protein.
       0.773
SFR36310.1
Hypothetical protein.
       0.773
SFR36288.1
Hypothetical protein.
       0.528
SFR36190.1
Hypothetical protein.
       0.419
SFR36198.1
Hypothetical protein.
       0.419
SFR36204.1
Hypothetical protein.
       0.419
SFR36212.1
Hypothetical protein.
       0.419
SFR36219.1
Hypothetical protein.
       0.419
SFR36226.1
Hypothetical protein.
       0.419
SFR36235.1
Hypothetical protein.
       0.419
Your Current Organism:
Halogeometricum rufum
NCBI taxonomy Id: 553469
Other names: CGMCC 1.7736, H. rufum, Halogeometricum rufum Cui et al. 2010, Halosarcina sp. RO1-4, Halosarcina sp. RO1-64, JCM 15770, strain RO1-4
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.