STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFR43666.1(R,R)-butanediol dehydrogenase / meso-butanediol dehydrogenase / diacetyl reductase. (361 aa)    
Predicted Functional Partners:
SFR40832.1
Pyruvate kinase; Belongs to the pyruvate kinase family.
   
 
  0.826
SFR47881.1
PTS system, fructose-specific IIA component.
  
 
  0.685
SFR36032.1
L-threonine aldolase.
  
 
 0.684
SFR43674.1
Hypothetical protein.
       0.537
SFR44916.1
Fructokinase.
  
 
 0.471
SFR47865.1
PTS system, fructose-specific IIB component.
   
 
  0.464
SFR47888.1
PTS system, fructose-specific IIC component.
   
 
  0.464
SFR68906.1
Hypothetical protein.
 
 
  0.427
Your Current Organism:
Halogeometricum rufum
NCBI taxonomy Id: 553469
Other names: CGMCC 1.7736, H. rufum, Halogeometricum rufum Cui et al. 2010, Halosarcina sp. RO1-4, Halosarcina sp. RO1-64, JCM 15770, strain RO1-4
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.