STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFR43816.1NADH-quinone oxidoreductase subunit I. (153 aa)    
Predicted Functional Partners:
SFR38807.1
NADH dehydrogenase subunit C.
 
 0.999
SFR39201.1
NADH dehydrogenase subunit F.
 
 0.999
SFR42743.1
Multicomponent Na+:H+ antiporter subunit A.
 
 0.999
SFR43784.1
NADH dehydrogenase subunit A.
 
 0.999
SFR43792.1
NADH dehydrogenase subunit B; Belongs to the complex I 20 kDa subunit family.
 
 0.999
SFR43798.1
NADH dehydrogenase subunit D.
 
 0.999
SFR43808.1
NADH dehydrogenase subunit H.
 
 0.999
SFR43824.1
NADH dehydrogenase subunit J.
  
 0.999
SFR43840.1
NADH dehydrogenase subunit K.
 
 0.999
SFR43854.1
NADH dehydrogenase subunit M.
 
 0.999
Your Current Organism:
Halogeometricum rufum
NCBI taxonomy Id: 553469
Other names: CGMCC 1.7736, H. rufum, Halogeometricum rufum Cui et al. 2010, Halosarcina sp. RO1-4, Halosarcina sp. RO1-64, JCM 15770, strain RO1-4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.