STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFR48145.1Glycerol-3-phosphate dehydrogenase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family. (407 aa)    
Predicted Functional Partners:
SFR48122.1
Glycerol-3-phosphate dehydrogenase subunit B.
 0.997
SFR35687.1
Fe-S oxidoreductase.
  
 
 0.990
SFR48129.1
Glycerol 3-phosphate dehydrogenase (quinone) subunit C.
 
  
 0.984
SFR69844.1
Iron-sulfur cluster-binding protein; Manually curated.
 
  
  0.961
SFR65938.1
FAD/FMN-containing dehydrogenase.
 
  
 0.960
SFR66528.1
FAD/FMN-containing dehydrogenase.
 
  
 0.960
SFR72034.1
FAD/FMN-containing dehydrogenase.
 
  
 0.959
SFR57244.1
FAD/FMN-containing dehydrogenase.
    
 0.954
SFR48151.1
Glycerol kinase; Partial gene; manually curated.
 
 
 0.934
SFR70697.1
Dihydroxyacetone kinase, phosphotransfer subunit.
 
  
 0.922
Your Current Organism:
Halogeometricum rufum
NCBI taxonomy Id: 553469
Other names: CGMCC 1.7736, H. rufum, Halogeometricum rufum Cui et al. 2010, Halosarcina sp. RO1-4, Halosarcina sp. RO1-64, JCM 15770, strain RO1-4
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