STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFR56364.1ATP-binding protein involved in chromosome partitioning; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family. (361 aa)    
Predicted Functional Partners:
SFR38807.1
NADH dehydrogenase subunit C.
     
 0.987
SFR43798.1
NADH dehydrogenase subunit D.
     
 0.987
SFR71677.1
NADH-quinone oxidoreductase subunit C/D.
     
 0.987
SFR43816.1
NADH-quinone oxidoreductase subunit I.
    
 0.656
SFR56409.1
Prokaryotic molybdopterin-containing oxidoreductase family, iron-sulfur binding subunit.
  
    0.624
SFR40832.1
Pyruvate kinase; Belongs to the pyruvate kinase family.
   
 
 0.618
SFR56397.1
Prokaryotic molybdopterin-containing oxidoreductase family, membrane subunit.
       0.594
SFR39201.1
NADH dehydrogenase subunit F.
     
 0.586
SFR43792.1
NADH dehydrogenase subunit B; Belongs to the complex I 20 kDa subunit family.
     
 0.580
SFR56386.1
Molybdopterin oxidoreductase.
       0.568
Your Current Organism:
Halogeometricum rufum
NCBI taxonomy Id: 553469
Other names: CGMCC 1.7736, H. rufum, Halogeometricum rufum Cui et al. 2010, Halosarcina sp. RO1-4, Halosarcina sp. RO1-64, JCM 15770, strain RO1-4
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