STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B1H19_00485Integrase; Frameshifted; incomplete; partial on complete genome; missing start and stop; Derived by automated computational analysis using gene prediction method: Protein Homology. (345 aa)    
Predicted Functional Partners:
ARF54762.1
Iron-sulfur cluster assembly scaffold protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.813
ARF58151.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.783
gmk
Guanylate kinase; Essential for recycling GMP and indirectly, cGMP.
 
  
 0.685
ARF58995.1
Peptidase M28; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.601
ARF56455.1
9-cis-epoxycarotenoid dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.591
ARF53563.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.566
ARF58895.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.507
ARF54491.1
Alanine racemase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.457
ARF57167.1
Amino acid deaminase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.457
B1H19_22040
Response regulator; Incomplete; partial on complete genome; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.456
Your Current Organism:
Streptomyces gilvosporeus
NCBI taxonomy Id: 553510
Other names: S. gilvosporeus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.