STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARF53287.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (70 aa)    
Predicted Functional Partners:
ARF53288.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
     0.945
ARF56748.1
DUF397 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.628
ARF53004.1
DUF397 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.572
ARF54585.1
DUF397 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.492
rpoB
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
  
 
 
 0.483
ARF56059.1
Plasmid replication initiator protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.478
ARF56781.1
DUF397 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.478
ARF56346.1
Plasmid replication initiator protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.468
ARF55967.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.462
ARF57886.1
DUF397 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.461
Your Current Organism:
Streptomyces gilvosporeus
NCBI taxonomy Id: 553510
Other names: S. gilvosporeus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.