Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ARF53860.1 | ARF54137.1 | B1H19_06410 | B1H19_07955 | Stress-inducible protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | DUF397 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.461 |
ARF53860.1 | B1H19_03565 | B1H19_06410 | B1H19_03565 | Stress-inducible protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | MFS transporter; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.587 |
ARF53860.1 | whiB-3 | B1H19_06410 | B1H19_22925 | Stress-inducible protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA. | 0.401 |
ARF53860.1 | whiB-6 | B1H19_06410 | B1H19_27065 | Stress-inducible protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | WhiB family transcriptional regulator; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA. | 0.423 |
ARF54137.1 | ARF53860.1 | B1H19_07955 | B1H19_06410 | DUF397 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Stress-inducible protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.461 |
B1H19_03565 | ARF53860.1 | B1H19_03565 | B1H19_06410 | MFS transporter; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology. | Stress-inducible protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.587 |
whiB-3 | ARF53860.1 | B1H19_22925 | B1H19_06410 | Hypothetical protein; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA. | Stress-inducible protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.401 |
whiB-6 | ARF53860.1 | B1H19_27065 | B1H19_06410 | WhiB family transcriptional regulator; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA. | Stress-inducible protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.423 |