STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARF54814.1Proteasome protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (317 aa)    
Predicted Functional Partners:
coaE
dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family.
       0.789
ARF54815.1
30S ribosomal protein S1; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.752
ARF59369.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.661
ARF59371.1
ATP-dependent helicase HrpB; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.630
ARF59370.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.575
ARF59221.1
XRE family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.482
ARF53651.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.482
ARF53856.1
DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.482
ARF53904.1
PPOX class F420-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.482
ARF54065.1
Pyridoxamine 5-phosphate oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.482
Your Current Organism:
Streptomyces gilvosporeus
NCBI taxonomy Id: 553510
Other names: S. gilvosporeus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.