STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARF54939.1AsnC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (93 aa)    
Predicted Functional Partners:
ARF59393.1
Rhomboid family intramembrane serine protease; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.879
ARF54938.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.745
ARF59392.1
RNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.731
ARF54937.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.650
ARF59014.1
TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.628
ARF54935.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.605
ARF59779.1
acyl-CoA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.550
ARF53392.1
Phosphopantetheine-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.498
ARF57633.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0109 family.
      
 0.493
ARF58275.1
Polyketide cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
      
 0.493
Your Current Organism:
Streptomyces gilvosporeus
NCBI taxonomy Id: 553510
Other names: S. gilvosporeus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.