Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ARF54425.1 | ARF54430.1 | B1H19_09590 | B1H19_09620 | Phosphatidylinositol mannoside acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | HIT family hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.700 |
ARF54425.1 | ARF55174.1 | B1H19_09590 | B1H19_14075 | Phosphatidylinositol mannoside acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Serine hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.412 |
ARF54430.1 | ARF54425.1 | B1H19_09620 | B1H19_09590 | HIT family hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Phosphatidylinositol mannoside acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.700 |
ARF54430.1 | ARF55174.1 | B1H19_09620 | B1H19_14075 | HIT family hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Serine hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.412 |
ARF55173.1 | ARF55174.1 | B1H19_14070 | B1H19_14075 | MerR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | Serine hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.603 |
ARF55174.1 | ARF54425.1 | B1H19_14075 | B1H19_09590 | Serine hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Phosphatidylinositol mannoside acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.412 |
ARF55174.1 | ARF54430.1 | B1H19_14075 | B1H19_09620 | Serine hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | HIT family hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.412 |
ARF55174.1 | ARF55173.1 | B1H19_14075 | B1H19_14070 | Serine hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | MerR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.603 |
ARF55174.1 | ARF55368.1 | B1H19_14075 | B1H19_15275 | Serine hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.469 |
ARF55174.1 | lgt | B1H19_14075 | B1H19_12060 | Serine hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family. | 0.758 |
ARF55174.1 | whiB-2 | B1H19_14075 | B1H19_18250 | Serine hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | WhiB family transcriptional regulator; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA. | 0.435 |
ARF55174.1 | whiB-4 | B1H19_14075 | B1H19_26245 | Serine hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | WhiB family transcriptional regulator; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA. | 0.505 |
ARF55368.1 | ARF55174.1 | B1H19_15275 | B1H19_14075 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Serine hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.469 |
lgt | ARF55174.1 | B1H19_12060 | B1H19_14075 | Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family. | Serine hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.758 |
whiB-2 | ARF55174.1 | B1H19_18250 | B1H19_14075 | WhiB family transcriptional regulator; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA. | Serine hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.435 |
whiB-4 | ARF55174.1 | B1H19_26245 | B1H19_14075 | WhiB family transcriptional regulator; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA. | Serine hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.505 |