STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARF55318.1Metal-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (508 aa)    
Predicted Functional Partners:
ARF55317.1
B12-binding domain-containing radical SAM protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.779
ARF55319.1
Rod shape-determining protein RodA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the SEDS family.
       0.767
ARF55320.1
Penicillin-binding protein 2; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.767
ARF55321.1
Rod shape-determining protein MreD; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.695
ARF55322.1
Rod shape-determining protein MreC; Involved in formation and maintenance of cell shape.
       0.695
ARF55323.1
Rod shape-determining protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.637
ndk
Nucleoside-diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family.
       0.611
ARF55325.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.604
ARF55326.1
Dihydrofolate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.604
ARF55314.1
Ribonuclease E/G; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.549
Your Current Organism:
Streptomyces gilvosporeus
NCBI taxonomy Id: 553510
Other names: S. gilvosporeus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.