STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CTM89_00625Unannotated protein. (241 aa)    
Predicted Functional Partners:
CTM89_04465
Unannotated protein.
  
     0.632
CTM89_13310
Unannotated protein.
  
     0.617
CRG86_013975
Unannotated protein.
  
     0.551
CTM89_18275
Unannotated protein.
  
     0.550
CTM89_13315
Unannotated protein.
  
     0.533
CTM89_01415
Unannotated protein.
  
     0.443
CRG86_000170
Unannotated protein.
 
     0.412
Your Current Organism:
Photobacterium leiognathi
NCBI taxonomy Id: 553611
Other names: ATCC 25521, CAIM 327, CCUG 16229, CIP 66.5, LMG 4228, LMG:4228, P. leiognathi, Photobacterium sp. CMB_001
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.