STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cybHUnannotated protein. (247 aa)    
Predicted Functional Partners:
CTM89_10230
Unannotated protein; Belongs to the [NiFe]/[NiFeSe] hydrogenase large subunit family.
 
 
 0.999
CTM89_10225
Unannotated protein.
 
 
 0.999
hybD
Unannotated protein.
 
  
 0.987
CTM89_10245
Unannotated protein.
     
 0.843
hypA
Unannotated protein; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase.
 
   
 0.796
hypB
Unannotated protein.
 
   
 0.701
hypC
Unannotated protein.
 
  
 0.680
CTM89_10285
Unannotated protein; Belongs to the HypD family.
 
  
 0.677
hypE
Unannotated protein.
 
   
 0.663
CTM89_06415
Unannotated protein.
 
   
 0.608
Your Current Organism:
Photobacterium leiognathi
NCBI taxonomy Id: 553611
Other names: ATCC 25521, CAIM 327, CCUG 16229, CIP 66.5, LMG 4228, LMG:4228, P. leiognathi, Photobacterium sp. CMB_001
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.