STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B7463_g12682Uncharacterized protein. (252 aa)    
Predicted Functional Partners:
B7463_g1484
B30.2/SPRY domain-containing protein.
    
 0.687
B7463_g9698
WD_REPEATS_REGION domain-containing protein.
    
 0.678
B7463_g12028
Histone H2B; Belongs to the histone H2B family.
    
  0.649
B7463_g12735
Histone H2A; Belongs to the histone H2A family.
    
  0.556
B7463_g10191
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
  0.556
B7463_g7645
AMPK1_CBM domain-containing protein.
    
  0.543
B7463_g424
AMPKBI domain-containing protein.
    
  0.543
B7463_g12269
Histone domain-containing protein.
    
  0.529
B7463_g9318
Uncharacterized protein.
    
  0.529
B7463_g6968
DUF2236 domain-containing protein.
    
  0.529
Your Current Organism:
Scytalidium lignicola
NCBI taxonomy Id: 5539
Other names: CBS 233.57, IMI 062532, MUCL 4172, S. lignicola, UAMH 385
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.