STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B7463_g12554G_PROTEIN_RECEP_F2_4 domain-containing protein. (635 aa)    
Predicted Functional Partners:
B7463_g11468
Uncharacterized protein.
 
  
 
 0.628
B7463_g10995
Uncharacterized protein.
    
  0.599
B7463_g12501
ANK_REP_REGION domain-containing protein.
   
  0.534
B7463_g9370
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
    
 0.529
B7463_g8609
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
    
 0.529
B7463_g2891
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
    
 0.529
B7463_g2872
GOLD domain-containing protein.
    
  0.478
B7463_g8338
MRG domain-containing protein.
   
  0.446
B7463_g1755
Lytic polysaccharide monooxygenase.
    
 0.445
B7463_g9320
Uncharacterized protein.
    
  0.431
Your Current Organism:
Scytalidium lignicola
NCBI taxonomy Id: 5539
Other names: CBS 233.57, IMI 062532, MUCL 4172, S. lignicola, UAMH 385
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.