STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B7463_g12409ANK_REP_REGION domain-containing protein. (739 aa)    
Predicted Functional Partners:
B7463_g2799
Uncharacterized protein.
 
      0.808
B7463_g9826
WD_REPEATS_REGION domain-containing protein.
    
 
 0.552
B7463_g6408
Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.
      
 0.514
B7463_g5590
Uncharacterized protein.
   
 
 0.485
B7463_g10982
ANK_REP_REGION domain-containing protein.
  
 
   0.483
B7463_g7985
Uncharacterized protein.
      
 0.481
B7463_g6248
Uncharacterized protein.
   
  
 0.468
B7463_g9317
ANK_REP_REGION domain-containing protein.
  
 
   0.452
B7463_g10453
Uncharacterized protein.
  
 
   0.451
B7463_g9637
Phospholipid-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily.
    
   0.451
Your Current Organism:
Scytalidium lignicola
NCBI taxonomy Id: 5539
Other names: CBS 233.57, IMI 062532, MUCL 4172, S. lignicola, UAMH 385
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