STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B7463_g12196Response regulatory domain-containing protein. (641 aa)    
Predicted Functional Partners:
B7463_g12380
Uncharacterized protein.
    
 0.991
B7463_g2344
Uncharacterized protein.
    
 0.991
B7463_g5680
Elongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
   
 0.973
B7463_g9171
WD_REPEATS_REGION domain-containing protein.
   
 0.969
B7463_g4095
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
    
 0.968
B7463_g1792
CS domain-containing protein.
   
 0.961
B7463_g8090
Hist_deacetyl domain-containing protein.
    
 0.959
B7463_g2918
Uncharacterized protein.
    
 0.959
B7463_g4393
HPt domain-containing protein.
    
 0.957
B7463_g11008
WD_REPEATS_REGION domain-containing protein.
     
 0.952
Your Current Organism:
Scytalidium lignicola
NCBI taxonomy Id: 5539
Other names: CBS 233.57, IMI 062532, MUCL 4172, S. lignicola, UAMH 385
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.