STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B7463_g11810CFEM domain-containing protein. (212 aa)    
Predicted Functional Partners:
B7463_g9515
B5 domain-containing protein.
  
 0.994
B7463_g6964
Uncharacterized protein.
   
 
 0.792
B7463_g4279
Dol-P-Man:Man(5)GlcNAc(2)-PP-Dol alpha-1,3-mannosyltransferase; Adds the first Dol-P-Man derived mannose in an alpha-1,3 linkage to Man(5)GlcNAc(2)-PP-Dol.
     
 0.711
B7463_g5048
Elongation factor Tu.
   
  
 0.685
B7463_g5729
Uncharacterized protein; Belongs to the PdxS/SNZ family.
   
   0.656
B7463_g9226
AA_TRNA_LIGASE_II domain-containing protein.
  
  
 0.655
B7463_g5030
Uncharacterized protein.
   
    0.629
B7463_g4668
Ribosomal_S7 domain-containing protein.
   
  
 0.626
B7463_g4401
Ribosomal_S7 domain-containing protein; Belongs to the universal ribosomal protein uS7 family.
   
  
 0.626
B7463_g4286
Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
  
 0.625
Your Current Organism:
Scytalidium lignicola
NCBI taxonomy Id: 5539
Other names: CBS 233.57, IMI 062532, MUCL 4172, S. lignicola, UAMH 385
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.