STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B7463_g11762Uncharacterized protein. (344 aa)    
Predicted Functional Partners:
B7463_g6676
Uncharacterized protein.
    
 
 0.863
B7463_g11311
TNase-like domain-containing protein.
    
 
 0.843
B7463_g7774
Uncharacterized protein.
   
    0.631
B7463_g8709
Uncharacterized protein.
    
 
 0.605
B7463_g10190
Uncharacterized protein.
   
 
 0.595
B7463_g8621
Uncharacterized protein.
   
 
 0.595
B7463_g3215
Uncharacterized protein.
   
 
 0.595
B7463_g11763
Uncharacterized protein.
 
      0.593
B7463_g3908
Sod_Cu domain-containing protein.
    
   0.578
B7463_g7556
Sod_Cu domain-containing protein.
    
   0.539
Your Current Organism:
Scytalidium lignicola
NCBI taxonomy Id: 5539
Other names: CBS 233.57, IMI 062532, MUCL 4172, S. lignicola, UAMH 385
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.