STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B7463_g11551ABC transporter domain-containing protein; Belongs to the ABC transporter superfamily. (734 aa)    
Predicted Functional Partners:
B7463_g6136
Uncharacterized protein.
    
 0.595
B7463_g10492
ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.
 
  
   0.476
B7463_g9178
Uncharacterized protein; Belongs to the ABC transporter superfamily.
  
  
 
0.472
B7463_g11940
Uncharacterized protein; Belongs to the ABC transporter superfamily.
  
  
 
0.471
B7463_g6488
Uncharacterized protein; Belongs to the ABC transporter superfamily.
  
  
 
0.469
B7463_g27
Uncharacterized protein; Belongs to the ABC transporter superfamily.
  
  
 
0.469
B7463_g4413
Uncharacterized protein; Belongs to the ABC transporter superfamily.
  
  
 
0.468
B7463_g12375
Uncharacterized protein; Belongs to the ABC transporter superfamily.
  
  
 
0.467
B7463_g284
ATP synthase subunit gamma.
   
   0.466
B7463_g6184
Serine/threonine-protein phosphatase.
    
 
 0.463
Your Current Organism:
Scytalidium lignicola
NCBI taxonomy Id: 5539
Other names: CBS 233.57, IMI 062532, MUCL 4172, S. lignicola, UAMH 385
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