STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B7463_g11677BAAT_C domain-containing protein. (280 aa)    
Predicted Functional Partners:
B7463_g514
Uncharacterized protein; Belongs to the peptidase M24B family.
   
 
 0.653
B7463_g7159
Uncharacterized protein.
     
 0.619
B7463_g9826
WD_REPEATS_REGION domain-containing protein.
    
 0.568
B7463_g9657
Uncharacterized protein.
    
 
 0.546
B7463_g1189
AMP_N domain-containing protein.
   
 
 0.532
B7463_g6872
Uncharacterized protein.
   
 
 0.497
B7463_g6871
Uncharacterized protein.
   
 
 0.497
B7463_g6007
Signal peptidase complex catalytic subunit SEC11.
   
 
 0.497
B7463_g9505
Uncharacterized protein.
     
 0.475
B7463_g4207
Uncharacterized protein.
     
 0.475
Your Current Organism:
Scytalidium lignicola
NCBI taxonomy Id: 5539
Other names: CBS 233.57, IMI 062532, MUCL 4172, S. lignicola, UAMH 385
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.