STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B7463_g11228Catalase domain-containing protein. (239 aa)    
Predicted Functional Partners:
B7463_g11227
Catalase domain-containing protein.
 
     0.951
B7463_g7045
Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.
   
 0.825
B7463_g5936
Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.
   
 0.825
B7463_g1502
Thiolase_C domain-containing protein.
   
 0.825
B7463_g7556
Sod_Cu domain-containing protein.
  
 0.721
B7463_g3908
Sod_Cu domain-containing protein.
  
 0.721
B7463_g9650
DJ-1_PfpI domain-containing protein.
  
 0.691
B7463_g6822
DJ-1_PfpI domain-containing protein.
  
 0.691
B7463_g1988
TPR_REGION domain-containing protein.
    
 0.668
B7463_g6913
SGL domain-containing protein.
   
 
 0.648
Your Current Organism:
Scytalidium lignicola
NCBI taxonomy Id: 5539
Other names: CBS 233.57, IMI 062532, MUCL 4172, S. lignicola, UAMH 385
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.