STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B7463_g10909Uncharacterized protein; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. (383 aa)    
Predicted Functional Partners:
B7463_g4315
Uncharacterized protein.
 
 
 0.993
B7463_g2915
Uncharacterized protein.
  
 
 0.989
B7463_g682
Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.
  
 
 0.985
B7463_g5185
N-acetyltransferase domain-containing protein.
  
 
 0.983
B7463_g10613
Uncharacterized protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
 
 0.982
B7463_g11786
Uncharacterized protein.
 
 
 0.973
B7463_g8990
Uncharacterized protein.
 
 
 0.973
B7463_g6483
Uncharacterized protein.
   
0.953
B7463_g1549
Uncharacterized protein.
  
 
 0.946
B7463_g8902
Uncharacterized protein.
  
 
 0.927
Your Current Organism:
Scytalidium lignicola
NCBI taxonomy Id: 5539
Other names: CBS 233.57, IMI 062532, MUCL 4172, S. lignicola, UAMH 385
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.