STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B7463_g11040ATP-dependent Clp protease proteolytic subunit. (239 aa)    
Predicted Functional Partners:
B7463_g10533
AAA domain-containing protein.
  
 
 0.954
B7463_g4349
Uncharacterized protein; Belongs to the peptidase M24B family.
  
 
 0.954
B7463_g364
Uncharacterized protein; Belongs to the ClpA/ClpB family.
  
 
 0.954
B7463_g6956
GrpE protein homolog; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the GrpE family.
  
 
 0.882
B7463_g5515
4Fe-4S ferredoxin-type domain-containing protein.
   
 
 0.858
B7463_g5048
Elongation factor Tu.
  
  
 0.847
B7463_g2932
ADF-H domain-containing protein; Belongs to the chaperonin (HSP60) family.
 
 
 0.825
B7463_g4154
Uncharacterized protein.
  
 
 0.817
B7463_g8056
Lon protease homolog; Belongs to the peptidase S16 family.
  
 
 0.781
B7463_g3452
Uncharacterized protein; Belongs to the peptidase S16 family.
  
 
 0.781
Your Current Organism:
Scytalidium lignicola
NCBI taxonomy Id: 5539
Other names: CBS 233.57, IMI 062532, MUCL 4172, S. lignicola, UAMH 385
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.