STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B7463_g10206Velvet domain-containing protein. (568 aa)    
Predicted Functional Partners:
B7463_g10808
Velvet domain-containing protein.
  
 
 
0.629
B7463_g8910
Uncharacterized protein.
    
 
 0.569
B7463_g10838
WD_REPEATS_REGION domain-containing protein.
   
 0.537
B7463_g8391
HTH APSES-type domain-containing protein.
    
 
 0.536
B7463_g3742
Ipi1_N domain-containing protein.
    
 0.507
B7463_g3787
BRCT domain-containing protein.
   
  0.480
B7463_g12305
Uncharacterized protein; Belongs to the universal ribosomal protein uS11 family.
    
  0.460
B7463_g5232
Uncharacterized protein.
    
 
 0.449
B7463_g5506
CLP1_P domain-containing protein.
    
  0.449
B7463_g4425
Uncharacterized protein.
    
 
 0.449
Your Current Organism:
Scytalidium lignicola
NCBI taxonomy Id: 5539
Other names: CBS 233.57, IMI 062532, MUCL 4172, S. lignicola, UAMH 385
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.