STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B7463_g9425Uncharacterized protein. (714 aa)    
Predicted Functional Partners:
B7463_g12501
ANK_REP_REGION domain-containing protein.
 
  
  0.897
B7463_g10882
PNP_UDP_1 domain-containing protein.
 
  
   0.859
B7463_g8021
PNP_UDP_1 domain-containing protein.
 
  
  0.791
B7463_g9426
ANK_REP_REGION domain-containing protein.
 
  
   0.759
B7463_g1363
ANK_REP_REGION domain-containing protein.
 
  
   0.705
B7463_g737
WD_REPEATS_REGION domain-containing protein.
    
 0.693
B7463_g655
RRN7-type domain-containing protein.
    
  0.672
B7463_g1080
WD_REPEATS_REGION domain-containing protein.
    
 0.654
B7463_g9698
WD_REPEATS_REGION domain-containing protein.
    
 0.646
B7463_g1484
B30.2/SPRY domain-containing protein.
    
 0.646
Your Current Organism:
Scytalidium lignicola
NCBI taxonomy Id: 5539
Other names: CBS 233.57, IMI 062532, MUCL 4172, S. lignicola, UAMH 385
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.