STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B7463_g8942Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. (420 aa)    
Predicted Functional Partners:
B7463_g3876
Protoporphyrinogen oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX.
 
 
 0.984
B7463_g12385
Uroporphyrinogen decarboxylase; Belongs to the uroporphyrinogen decarboxylase family.
 
  
 0.964
B7463_g8104
Uncharacterized protein.
    
 0.946
B7463_g9287
MFS domain-containing protein.
 
    
 0.896
B7463_g4472
Uncharacterized protein.
    
 0.893
B7463_g6136
Uncharacterized protein.
  
 
 0.890
B7463_g2529
Uncharacterized protein.
   
 
 0.881
B7463_g8
Cytochrome c heme lyase; Links covalently the heme group to the apoprotein of cytochrome c.
     
 0.784
B7463_g173
Cytochrome c heme lyase; Links covalently the heme group to the apoprotein of cytochrome c.
     
 0.784
B7463_g9643
Uncharacterized protein.
    
 0.783
Your Current Organism:
Scytalidium lignicola
NCBI taxonomy Id: 5539
Other names: CBS 233.57, IMI 062532, MUCL 4172, S. lignicola, UAMH 385
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