STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B7463_g8894Ribosomal_L18_c domain-containing protein. (311 aa)    
Predicted Functional Partners:
B7463_g12442
Uncharacterized protein.
  
 0.999
B7463_g12388
60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.
  
 0.999
B7463_g12307
Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.
  
 0.999
B7463_g11824
60S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family.
  
 0.999
B7463_g11115
Ribosomal_L14e domain-containing protein.
  
 0.999
B7463_g11033
Uncharacterized protein; Belongs to the universal ribosomal protein uL13 family.
  
 0.999
B7463_g10657
Ribosomal_L28e domain-containing protein.
   
 0.999
B7463_g9455
Uncharacterized protein.
  
 0.999
B7463_g7638
Ribosomal_L18e/L15P domain-containing protein.
  
 0.999
B7463_g7224
Ribosomal_L18e/L15P domain-containing protein; Belongs to the universal ribosomal protein uL15 family.
  
 0.999
Your Current Organism:
Scytalidium lignicola
NCBI taxonomy Id: 5539
Other names: CBS 233.57, IMI 062532, MUCL 4172, S. lignicola, UAMH 385
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.