STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B7463_g8220Aconitate hydratase, mitochondrial; Belongs to the aconitase/IPM isomerase family. (800 aa)    
Predicted Functional Partners:
B7463_g5365
Iso_dh domain-containing protein.
  
 0.910
B7463_g5366
Uncharacterized protein.
  
 0.910
B7463_g12525
Citrate synthase; Belongs to the citrate synthase family.
  
 0.907
B7463_g3682
Citrate synthase; Belongs to the citrate synthase family.
  
 0.907
B7463_g3523
Citrate synthase; Belongs to the citrate synthase family.
  
 0.907
B7463_g2818
Isocitrate dehydrogenase [NAD] subunit, mitochondrial.
   
 0.890
B7463_g12124
Aconitate hydratase, mitochondrial; Belongs to the aconitase/IPM isomerase family.
  
 
0.889
B7463_g7773
Isocitrate dehydrogenase [NAD] subunit, mitochondrial; Belongs to the isocitrate and isopropylmalate dehydrogenases family.
   
 0.889
B7463_g2838
Homoaconitase, mitochondrial; Catalyzes the reversible hydration of cis-homoaconitate to (2R,3S)-homoisocitrate, a step in the alpha-aminoadipate pathway for lysine biosynthesis.
   
 
 
0.889
B7463_g176
Uncharacterized protein.
  
 0.875
Your Current Organism:
Scytalidium lignicola
NCBI taxonomy Id: 5539
Other names: CBS 233.57, IMI 062532, MUCL 4172, S. lignicola, UAMH 385
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