STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B7463_g7867Uncharacterized protein. (420 aa)    
Predicted Functional Partners:
B7463_g9170
Uncharacterized protein.
    
 0.980
B7463_g5219
WD_REPEATS_REGION domain-containing protein.
   
 0.979
B7463_g3244
Uncharacterized protein.
    
 0.978
B7463_g1471
Arf-GAP domain-containing protein.
   
 0.972
B7463_g2888
WD_REPEATS_REGION domain-containing protein.
   
  0.963
B7463_g5334
Coatomer subunit delta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.
   
 0.950
B7463_g5025
Coatomer subunit zeta; The zeta subunit may be involved in regulating the coat assembly and, hence, the rate of biosynthetic protein transport due to its association-dissociation properties with the coatomer complex.
    
 0.926
B7463_g357
Uncharacterized protein.
   
 0.887
B7463_g367
Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.
   
 0.887
B7463_g10215
t-SNARE coiled-coil homology domain-containing protein.
    
 0.844
Your Current Organism:
Scytalidium lignicola
NCBI taxonomy Id: 5539
Other names: CBS 233.57, IMI 062532, MUCL 4172, S. lignicola, UAMH 385
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.