STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B7463_g7645AMPK1_CBM domain-containing protein. (609 aa)    
Predicted Functional Partners:
B7463_g12005
Uncharacterized protein.
   
 0.910
B7463_g7102
Uncharacterized protein.
   
 0.910
B7463_g4728
Uncharacterized protein.
   
 0.910
B7463_g7094
Uncharacterized protein.
   
 0.863
B7463_g1070
Glycogen [starch] synthase; Transfers the glycosyl residue from UDP-Glc to the non- reducing end of alpha-1,4-glucan.
   
 0.860
B7463_g10662
Rap-GAP domain-containing protein.
   
 0.792
B7463_g5389
Uncharacterized protein.
    
 0.783
B7463_g9826
WD_REPEATS_REGION domain-containing protein.
    
 0.770
B7463_g9171
WD_REPEATS_REGION domain-containing protein.
     
 0.756
B7463_g9084
Protein kinase domain-containing protein.
    
 0.754
Your Current Organism:
Scytalidium lignicola
NCBI taxonomy Id: 5539
Other names: CBS 233.57, IMI 062532, MUCL 4172, S. lignicola, UAMH 385
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.