STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B7463_g7556Sod_Cu domain-containing protein. (235 aa)    
Predicted Functional Partners:
B7463_g9434
HMA domain-containing protein.
   
 0.971
B7463_g9650
DJ-1_PfpI domain-containing protein.
  
 0.914
B7463_g6822
DJ-1_PfpI domain-containing protein.
  
 0.907
B7463_g10308
Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
   
 0.879
B7463_g8598
Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
   
 0.879
B7463_g11060
Uncharacterized protein.
   
 0.868
B7463_g6906
Glutathione peroxidase; Belongs to the glutathione peroxidase family.
   
 0.861
B7463_g3544
Adenosinetriphosphatase/Nucleoside-triphosphate phosphatase; Belongs to the heat shock protein 70 family.
   
 0.846
B7463_g8078
Thioredoxin domain-containing protein.
   
 0.801
B7463_g7136
VWFA domain-containing protein.
   
  0.798
Your Current Organism:
Scytalidium lignicola
NCBI taxonomy Id: 5539
Other names: CBS 233.57, IMI 062532, MUCL 4172, S. lignicola, UAMH 385
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